My PhD research is to develop tools that predict the interaction of proteins with engineered surfaces. This work has applications in the development of biomedical devices (such as neural implants and point-of-care diagnostics), biosensors, and hybrid neural systems.
My pages about scientific computing:
- Optimizing fast Python math with Numpy and Scipy (coming soon!)
- Calculating the pair correlation function with Python
- Generating VTK files with Python for visualization in Paraview
- Visualizing trajectories with Python, VMD, and .vtf files
- Compiling LAPACK with the Intel Fortran Compiler
- ODEPACK: a library for numerically solving a system of ordinary differential equations
- Boost.Python Examples and Tutorials
Useful links:
Books I refer to:
http://rcm.amazon.com/e/cm?lt1=_blank&bc1=FFFFFF&IS2=1&bg1=FFFFFF&fc1=000000&lc1=0000FF&t=shocksolution-20&o=1&p=8&l=as1&m=amazon&f=ifr&asins=0198526938http://rcm.amazon.com/e/cm?lt1=_blank&bc1=FFFFFF&IS2=1&bg1=FFFFFF&fc1=000000&lc1=0000FF&t=shocksolution-20&o=1&p=8&l=as1&m=amazon&f=ifr&asins=0132269937